Allnutt, T.F., G.P. Asner, C. Golden, G. V. N. Powell. 2013. Mapping recent deforestation and forest disturbance in northeastern Madagascar. Tropical Conservation Science Vol. 6(1):1-15.

Allnutt, T.F., T.R. McClanahan, S. Andréfouët, M. Baker, E. Lagabrielle, C. McClennen, A.J.M. Rakotomanjaka, T.F. Tianarisoa, R. Watson, C. Kremen. 2012. Comparison of marine spatial planning methods in Madagascar demonstrates value of alternative approaches. PLoS ONE 7(2): e28969. doi:10.1371/journal.pone.0028969.

Olson, D., D.A. DellaSala, R.F. Noss, J.R. Strittholt, J. Kass, M.E. Koopman, T.F. Allnutt. 2012. Climate change refugia for biodiversity in the Klamath-Siskiyou Ecoregion. Natural Areas Journal 32(1):65-74. doi:

Kremen, C, A. Cameron, T. Allnutt, A. Razafimpahanana. 2010. Rare and threatened species and conservation planning in Madagascar. Pages 221-222 in: Sodhi, N. and P. Ehrlich, eds. Conservation biology for all. Oxford University Press. 344 pp.

Olson, D., L. Farley, A. Patrick, D. Watling, M. Tuiwawa, V. Masibalavu, L. Lenoa, A. Bogiva, I. Qauqau, J. Atherton, A. Caginitoba, M. Tokota'a, S. Prasad, W. Naisilisili, A. Raikabula, K. Mailautoka, C. Morley, T. Allnutt. 2009. Priority forests for conservation in Fiji: landscapes, hotspots and ecological processes. Oryx, 44(1):57-70.

Allnutt, T.F., S. Ferrier, G. Manion, G.V.N. Powell, T.H. Ricketts, B.L. Fisher, G.J. Harper, M.E. Irwin, C. Kremen, J-N. Labat, D.C. Lees, T.A. Pearce, and F. Rakotondrainibe. 2008. A method for quantifying biodiversity loss and its application to a 50-year record of deforestation across Madagascar. Conservation Letters 1:173-181.

Kark, S., T.F. Allnutt, N. Levin, L.L. Manne, and P.H. Williams. 2007. The role of areas of transition as avian biodiversity centers. Global Ecology and Biogeography, 16: 187–196.

Ridgely, R.S., T.F. Allnutt, T.M. Brooks, D.K. McNicol, D. Mehlman, B.E. Young, and J.R. Zook. 2007. Distribution Maps of Western Hemisphere Birds, version 3.0. NatureServe, Arlington, Virginia, USA.

Allnutt, T.F., Dia, I.M. and Touray, O. 2007. Biodiversity Monitoring System and Database for The Gambia. Unpublished report.

Schipper, J., G. Clarke, and T. Allnutt. 2007. Conservation Planning in a Tropical Wilderness: Opportunities and Threats in the Guianan Ecoregion Complex. In: Watson, A., Sproull, J., Dean, L., comps. Science and stewardship to protect and sustain wilderness values: 8th World Wilderness Congress symposium: September 30–October 6, 2005; Anchorage, AK. Proceedings RMRS-P-49. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station.

Mace, G.M., et al. 2005. Biodiversity. In: N.J. Ash, R. Hassan, and R. Scholes, eds. Millennium Ecosystem Assessment. Ecosystems and human well-being, v.1: Current state and trends. Island Press, Washington.

Allnutt, T. 2005. Mapping and modelling as tools to set targets, identify opportunities and measure progress. In: S. Mansourian et al., eds. Forest Landscape Restoration Resource Manual. Springer. Dresden.

Ferrier, S., G.V.N. Powell, K.S. Richardson, G. Manion, J.M. Overton, T.F Allnutt, et al. 2004. Mapping More of Terrestrial Biodiversity for Global Conservation Assessment: A New Approach to Integrating Disparate Sources of Biological and Environmental Data. BioScience 54(12): 1101-1109.

Allnutt, T. F., E. D. Wikramanayake, E. Dinerstein, C. Loucks, R. Jackson, and C. Carpenter. 2004. Protected Areas in the Himalaya. In: Yonzon et al., Eds. People and Protected Areas in South Asia. UNEP.

Moore, J., A. Balmford, T. Allnutt and N. Burgess. 2004. Integrating costs into conservation planning across Africa. Biological Conservation 117: 343-350.

Allnutt, T., Wettengel, W., Reyna, J.V., de Leon Garcia, R.C., Inigo Elias, E.E., Olson, D.M. 2002. The efficacy of TM satellite imagery for rapid assessment of Chihuahan xeric habitat intactness for ecoregion-scale conservation planning. Journal of Arid Environments 52(1):138.

Malcolm, J.R., Liu, C., Miller, L.B., Allnutt, T., Hansen, L. 2002. Habitats at Risk: Global Warming and Species Loss in Globally Significant Terrestrial Ecosystems. WWF International, Gland.

Lamoreux, J.F., Brooks, T.M., and Allnutt, T.F. 2001. Endemic Mammal Areas of Africa. Poster presentation at the 2001 Society for Conservation Biology annual meeting, Hilo, HI.

Olson D.M., Dinerstein, E., Wikramanayake, E.D., Burgess, N.D., Powell, G.V.N, Underwood, E.C., D'amico, J.A., Itoua, I., Strand, H.E., Morrison, J.C., Loucks, C.J., Allnutt, T.F., Ricketts, T.H., Kura Y., Lamoreux, J.F., Wettengel, W.W., Hedao, P. and Kassem, K.R. 2001. Terrestrial Ecoregions of the World: A New Map of Life on Earth. BioScience 51:11 pp. 933-938.

Abell, R., D.M. Olson, E. Dinerstein, P. Hurley, W. Eichbaum, S. Walters, W. Wettengel, T. Allnutt, and C. Loucks. 1999. A conservation assessment of the freshwater ecoregions of North America. Island Press, Washington DC.

Allnutt, T. 1999. Priorities for conservation in the Neotropics: The contribution of avifauna to the selection of globally outstanding ecoregions. Paper presented at the 6th Neotropical Ornithological Conference, Monterrey, Mexico.

Allnutt, T. 1998. Land cover change and population viability in the Atlantic Forest, Brazil: Contributions of remote sensing and GIS. Poster presentation at the 1998 Society for Conservation Biology annual meeting, Sydney, Australia.

Submitted or in prep:
Baker-Médard et al. Considering fisheries costs versus benefits in conservation planning.